In this case, the conditions for the generation of the MRM-triggered spectra were as follows: DP ramped from 25 to 50, CE 15-45, CXP 12. AHL with or

without a 3-oxo or a 3-hydroxy substitution and with an acyl side chain length of 4 (C4-HSL, 3-oxo-C4-HSL and 3-hydroxy-C4-HSL), 6 (C6-HSL, 3-oxo-C6-HSL and 3-176 hydroxy-C6- HSL), 7 (C7-HSL), 8 (C8-HSL, 3-oxo-C8-HSL and 3-hydroxy-C8-HSL), 10 (C10-HSL, 3-oxo-C10-HSL and 3-hydroxy-C10-HSL), 12 (C12-HSL, 3-oxo-C12-HSL and 3-hydroxy-C12-HSL), 13 (C13-HSL, 3-oxo-C13-HSL and 3-hydroxy-C13-HSL) or 14 (C14-HSL, 3-oxo-C14-HSL and 3-hydroxy-C14-HSL) were used as standards. Acyl-HSLs were identified and confirmed by comparing both the elution time and the spectra from any peaks obtained with those of the standards. Chromobacterium AZD4547 cell line violaceum-based solid plate assays (McClean et al., 1997) were carried out to detect AHL degradation activity in T. maritimum NCIMB2154T. Two different sensor strains were used to detect AHL degradation. Chromobacterium violaceum CV026 (McClean et al., 1997) was used to measure the degradation of C6-HSL and C. violaceum VIR07 was used to measure the degradation of C10-HSL (Morohoshi et al., 2008). Twenty microlitres

of stock solutions of C6-HSL or C10-HSL were added to 500 μL of an overnight culture of T. maritimum NCIMB2154T Epacadostat in vivo in MB (final concentration 2 μg mL−1) and incubated for 24 h at 20 °C. The same amount of AHL was added to 500 μL of spent culture medium obtained from a 24-h-old culture by filtration through 0.22 μm. The amount of remaining AHL in the culture media of T. maritimum was evaluated in LB plates overlaid with 5 mL of semi-solid LB agar seeded with 500 μL of overnight cultures of C. violaceum CV026 for C6-HSL or C. violaceum VIR07 for C10-HSL. Fifty microlitres of Nutlin-3 culture supernatants were loaded in wells and adjusted to 100 μL with distilled water. Sterile MB and MB plus C4 or C10-SHLs were set as controls. The same experiment was carried out in FMM broth (data not

shown). Plates were incubated for 12–24 h and the production of violacein was examined. To evaluate the possible type of AHL degradation activity, two flasks with 15 mL of FMM were supplemented with C10-HSL to a final concentration of 2 μg mL−1. One of them was inoculated with 1 mL of a 48-h culture of T. maritimum NCIMB2154T and the other was maintained as control. Flasks were incubated in a shaker at 22 °C under soft agitation (110 r.p.m.). After 24 h, 500 μL of normal and acidified culture media were extracted three times with ethyl acetate, dehumidified onto MgSO4, evaporated under nitrogen flux and resuspended in acetonitrile for LC-MS analysis as described above. Before inoculation, 500 μL of FMM+C10-HSL were also extracted and the value of C10-HSL obtained was used to calculate the percentage of degradation.